Synechocystis sp. PCC6803 Search Result

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Items : 1 - 11 of 11 hits
ORF ID KEGG ID Gene name Definition KO EC number Comment Category Position Start position Length Last update Last annotator Reference
sll1452 syn:sll1452 nrtC ABC-type nitrate/nitrite transport system ATP-binding protein K02049   Amino acids 281-670 of this protein comprise a distinct domain, which is 30% identical to NrtA. As in Synechococcus sp. strain PCC s7942, the C-terminal domain of NrtC has been shown to be involved in ammonium-promoted inhibition of nitrate/nitrite transport (T. Omata) ; Synergistic regulation of bicarbonate and nitrate transport, suggested by Koropatkin et al. (2006). ABC transporters complement(1006234..1008246) 1006234 670 2007-06-22 23:13:17 Taton, Arnaud 1.Aichi M, Takatani N, Omata T (2001) Role of NtcB in activation of nitrate assimilation genes in the cyanobacterium Synechocystis sp. strain PCC 6803. J Bacteriol 183:5840-7. [PMID:11566981]
2.Kobayashi M, Takatani N, Tanigawa M, Omata T (2005) Posttranslational Regulation of Nitrate Assimilation in the Cyanobacterium Synechocystis sp. Strain PCC 6803. J Bacteriol 187:498-506. [PMID:15629921]
3.Koropatkin NM, Pakrasi HB, Smith TJ (2006) Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity. Proc Natl Acad Sci U S A 103:9820-5. [PMID:16777960]

sll1451 syn:sll1451 nrtB ABC-type nitrate/nitrite transport system permease protein K02050  
FUNCTIONs  - PHYSIOLOGICAL-ROLE: Active transport of nitrate s  - PROTEIN-FUNCTION: permease protein 'DED: similarity with Synechococcus ssp. PCC 7942 'REF: Aichi et al. 2001sPROTEIN-FAMILY: Super-family of ABC transporters sLOCALIZATION/STRUCTURE: -sREGULATIONs  - OPERON-STRUCTURE:  nrtABCD-narB (nrtABCD-?ssl2814?-narB in CYORF) `EXP: sNorthern hybridization nrtC-specific probe indicated the presence of a slarge transcription unit / narB-specific probe yielded essentially the same shybridization profile / the size of the largest signal was close to the scalculated size of the nrt-ABCD-narB gene cluster. `REF: Aichi et al. 2001s  - REGULATOR: NtcA binding site, 20 bp upstream from the -10 promoter selement of nrtA `EXP `REF: Aichi et al. 2001s  - PROMOTER: promoter contained an inverted repeat carrying a LysR motif s(TN11A), centered at position -24 with respect to the NtcA-binding motif ssupposed to constitute the binding site for NtcB `REF: Aichi et al. 2001s  - EXPRESSION: The expression of nrtABCD-narB is repressed by ammonium and sinduced by inhibition of ammonium assimilation, suggesting involvement of sNtcA. / Under inducing conditions, expression of the transcription unit is senhanced by nitrite, suggesting regulation by NtcB. `REF: Aichi et al. 2001sMUTANTS: -sOTHER COMMENTS: `HYP: synergistic regulation of bicarbonate and nitrate stransport `REF: Koropatkin et al. 2006
ABC transporters complement(1008321..1009148) 1008321 275 2006-09-26 20:14:43 Taton, Arnaud 1.Aichi M, Takatani N, Omata T (2001) Role of NtcB in activation of nitrate assimilation genes in the cyanobacterium Synechocystis sp. strain PCC 6803. J Bacteriol 183:5840-7. [PMID:11566981]

sll1450 syn:sll1450 nrtA ABC-type nitrate/nitrite transport system substrate-binding protein K02051  
FUNCTIONs  - PHYSIOLOGICAL-ROLE: Active transport of nitrate s  - PROTEIN-FUNCTION: nitrate- and nitrite-binding lipoprotein `DED: ssimilarity with Synechococcus sp. PCC 7942 `REF: Aichi et al. 2001sPROTEIN-FAMILY: Super-family of ABC transporters sLOCALIZATION/STRUCTURE: crystal structure determined `REF: Koropatkin et sal. 2006sREGULATIONs  - OPERON-STRUCTURE:  nrtABCD-narB (nrtABCD-?ssl2814?-narB) `EXP: Northern shybridization nrtC-specific probe indicated the presence of a large stranscription unit / narB-specific probe yielded essentially the same shybridization profile / the size of the largest signal was close to the scalculated size of the nrt-ABCD-narB gene cluster. `REF: Aichi et al. 2001s  - REGULATOR: NtcA binding site, 20 bp upstream from the -10 promoter selement of nrtA `EXP `REF: Aichi et al. 2001s  - PROMOTER: promoter contained an inverted repeat carrying a LysR motif s(TN11A), centered at position -24 with respect to the NtcA-binding motif ssupposed to constitute the binding site for NtcB `REF: Aichi et al. 2001s  - EXPRESSION: The expression of nrtABCD-narB is repressed by ammonium and sinduced by inhibition of ammonium assimilation, suggesting involvement of sNtcA. / Under inducing conditions, expression of the transcription unit is senhanced by nitrite, suggesting regulation by NtcB. `REF: Aichi et al. 2001sMUTANTS: -sOTHER COMMENTS: synergistic regulation of bicarbonate and nitrate transports`HYP `REF: Koropatkin et al. 2006
ABC transporters complement(1009234..1010574) 1009234 446 2006-09-27 17:24:24 Omata, Tatsuo 1.Aichi M, Takatani N, Omata T (2001) Role of NtcB in activation of nitrate assimilation genes in the cyanobacterium Synechocystis sp. strain PCC 6803. J Bacteriol 183:5840-7. [PMID:11566981]
2.Kobayashi M, Takatani N, Tanigawa M, Omata T (2005) Posttranslational Regulation of Nitrate Assimilation in the Cyanobacterium Synechocystis sp. Strain PCC 6803. J Bacteriol 187:498-506. [PMID:15629921]
3.Koropatkin NM, Pakrasi HB, Smith TJ (2006) Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity. Proc Natl Acad Sci U S A 103:9820-5. [PMID:16777960]

sll1634 syn:sll1634   hypothetical protein         complement(1010710..1011759) 1010710 349 2001-12-28 18:41:31 system  
slr1748 syn:slr1748   hypothetical protein         1011975..1012619 1011975 214 2001-12-28 18:41:31 system  
ssl3177 syn:ssl3177 repA rare lipoprotein A         complement(1012616..1012888) 1012616 90 2001-12-28 18:42:14 system  
sll1633 syn:sll1633 ftsZ cell division protein FtsZ K03531       complement(1013045..1014337) 1013045 430 2002-04-16 10:09:51 system 1.Sarcina M, Mullineaux CW (2000) Effects of tubulin assembly inhibitors on cell division in prokaryotes in vivo. FEMS Microbiol Lett 191:25-9. [PMID:11004395]

sll1632 syn:sll1632   hypothetical protein K03589       complement(1014587..1015396) 1014587 269 2001-12-28 18:41:31 system  
slr1751 syn:slr1751 prc, tsp periplasmic carboxyl-terminal protease K03797 3.4.21.102     1015511..1016782 1015511 423 2002-04-19 12:13:24 system 1.Fulda S, Huang F, Nilsson F, Hagemann M, Norling B (2000) Proteomics of Synechocystis sp. strain PCC 6803. Identification of periplasmic proteins in cells grown at low and high salt concentrations. Eur J Biochem 267:5900-7. [PMID:10998049]

slr1752 syn:slr1752   hypothetical protein         1016830..1017495 1016830 221 2001-12-28 18:41:31 system  
sll1144 syn:sll1144   hypothetical protein K03438 2.1.1.-     complement(1017600..1018517) 1017600 305 2001-12-28 18:41:31 system